MolNFT v1 · #12854 · protein
DNA polymerase
1KTQ · DNA polymerase I: “DNA polymerase”. X-ray diffraction, 4 pockets (best druggability 0.61). MolNFT v1 #12854 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1KTQ
- Type
- protein
- Length
- 534 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA polymerase I
- EC
- 2.7.7.7
- UniProt
- P19821
- Pockets
- 4 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase I (EC 2.7.7.7) | protein | 534 | 53% helix, 13% strand | P19821 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 237 | 0.61 | 0.81 | 31 | empty |
| 2 | 312 | 0.56 | 0.76 | 33 | empty |
| 3 | 137 | 0.49 | 0.79 | 19 | empty |
| 4 | 59 | 0.39 | 0.80 | 14 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19821
- Elsewhere: RCSB PDB 1KTQ · PDBe 1KTQ · UniProt P19821
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