MolNFT v1 · #128302 · protein
Crystal structure of ZN3-HUB(HUMAN ubiquitin) adduct from a solution 70 mm zinc ACETATE/20% V/V TFE/1.3 mm hub
5NMC: “Crystal structure of ZN3-HUB(HUMAN ubiquitin) adduct from a solution 70 mm zinc ACETATE/20% V/V TFE/1.3 mm hub”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #128302 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NMC
- Type
- protein
- Length
- 219 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0CG48
- Ligands
- ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 72 | — | P0CG48 |
| B | — | protein | 74 | — | P0CG48 |
| C | — | protein | 73 | — | P0CG48 |
Ligands and binding sites
- ZN · Zinc ion · metal · 9 copies · chains A, C, B
- ACT · Acetate ion · additive · 5 copies · chains A, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NMC · Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 70 mM zinc… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CG48
- Elsewhere: RCSB PDB 5NMC · PDBe 5NMC · UniProt P0CG48
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