MolNFT v1 · #128257 · protein
Shigella ipaa-VBS3/TBS in complex with the talin VBS1 domain 488-512
5NL1: “Shigella ipaa-VBS3/TBS in complex with the talin VBS1 domain 488-512”. X-ray diffraction, 2 ligands (SO4, CL). MolNFT v1 #128257 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NL1
- Type
- protein
- Length
- 991 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P26039, P18010
- Ligands
- SO4, CL
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 141 | — | P26039 |
| B, E, F | — | protein | 142 | — | P26039 |
| C | — | protein | 140 | — | P26039 |
| G, L | — | protein | 22 | — | P18010 |
| H, I | — | protein | 23 | — | P18010 |
| J | — | protein | 26 | — | P18010 |
| K | — | protein | 27 | — | P18010 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 3 copies · chains E, H, F, I
- CL · Chloride ion · ion · chains D
- EDO · 1,2-ethanediol · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NL1 · Shigella IpaA-VBS3/TBS in complex with the Talin VBS1 domain 488-512 · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P26039
- Every structure of UniProt P18010
- Elsewhere: RCSB PDB 5NL1 · PDBe 5NL1 · UniProt P26039 · UniProt P18010
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