MolNFT v1 · #128138 · protein
Crystal structure of apo xylose isomerase from piromyces E2
5NHM: “Crystal structure of apo xylose isomerase from piromyces E2”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #128138 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NHM
- Type
- protein
- Length
- 1,742 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9P8C9
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 436 | — | Q9P8C9 |
| B, C | — | protein | 435 | — | Q9P8C9 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 4 copies · chains A, B, C, D
- GOL · Glycerol · additive · 7 copies · chains A, B, C, D
- ACY · Acetic acid · additive · 2 copies · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NHM · Crystal structure of apo xylose isomerase from Piromyces E2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9P8C9
- Elsewhere: RCSB PDB 5NHM · PDBe 5NHM · UniProt Q9P8C9
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