MolNFT v1 · #12807 · protein

The structure of endoglucanase from termite, nasutitermes takasagoensis, at pH 6.5.

1KSD · Endo-B-1,4-glucanase: “The structure of endoglucanase from termite, nasutitermes takasagoensis, at pH 6.5.”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.53). MolNFT v1 #12807 on GenesisL1: 3D structure, binding…

PDB: 1KSD
Type: protein
Length: 433 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Endo-B-1,4-glucanase
EC: 3.2.1.4
UniProt: O77044
Ligands: CA
Pockets: 1 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 52% helix, 6% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Endo-B-1,4-glucanase (EC 3.2.1.4)	protein	433	52% helix, 6% strand	O77044

Ligands and binding sites

CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	196	0.53	0.78	21	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1KSD · The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 6.5. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O77044
Elsewhere: RCSB PDB 1KSD · PDBe 1KSD · UniProt O77044

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.