MolNFT v1 · #128068 · protein
Crystal structure of the methyltransferase subunit of human mitochondrial ribonuclease P (MRPP1) bound to S-adenosyl-methionine (SAM)
5NFJ: “Crystal structure of the methyltransferase subunit of human mitochondrial ribonuclease P (MRPP1) bound to…”. X-ray diffraction. MolNFT v1 #128068 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NFJ
- Type
- protein
- Length
- 536 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q7L0Y3
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 179 | — | Q7L0Y3 |
| B | — | protein | 178 | — | Q7L0Y3 |
Ligands and binding sites
- GOL · Glycerol · additive · 7 copies · chains A, C, B
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NFJ · Crystal structure of the methyltransferase subunit of human mitochondrial Ribonuclease P… · the same entry in another collection · chain C against C, TM-score 0.99
- Q7L0Y3 · AlphaFold monomer V2.0 prediction for tRNA methyltransferase 10 homolog C (Q7L0Y3) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7L0Y3
- Elsewhere: RCSB PDB 5NFJ · PDBe 5NFJ · UniProt Q7L0Y3
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