MolNFT v1 · #128064 · protein
Crystal structure of GP1 receptor binding domain from morogoro virus
5NFF: “Crystal structure of GP1 receptor binding domain from morogoro virus”. X-ray diffraction, 2 ligands (NAG, MAN). MolNFT v1 #128064 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NFF
- Type
- protein
- Length
- 2,496 residues
- Chains
- 16
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C6ZK00
- Ligands
- NAG, MAN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A, C, D, E, F, G, H, I, J, K, L, M, N, O, P | — | protein | 156 | — | C6ZK00 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 23 copies · chains B, F, H, O, A, C, D, E, G, I, J, K, L
- MAN · alpha-D-mannopyranose · sugar · 5 copies · chains G, H, O
- CIT · Citric acid · additive · 6 copies · chains B, C, F, E, I, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NFF · Crystal structure of GP1 receptor binding domain from Morogoro virus · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6ZK00
- Elsewhere: RCSB PDB 5NFF · PDBe 5NFF · UniProt C6ZK00
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