MolNFT v1 · #128052 · protein

The fimbrial shaft protein MFA1 from porphyromonas gingivalis-C- terminal deletion

5NF3: “The fimbrial shaft protein MFA1 from porphyromonas gingivalis-C- terminal deletion”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #128052 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5NF3
Type: protein
Length: 497 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: B2RHG1
Ligands: CA

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	497	—	B2RHG1

Ligands and binding sites

CA · Calcium ion · metal · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5NF3 · The fimbrial shaft protein Mfa1 from Porphyromonas gingivalis-C-terminal deletion · the same entry in another collection · chain A against A, TM-score 1.00
B2RHG1 · AlphaFold monomer V2.0 prediction for minor fimbrium subunit MFA1 (B2RHG1) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B2RHG1
Elsewhere: RCSB PDB 5NF3 · PDBe 5NF3 · UniProt B2RHG1

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