MolNFT v1 · #127466 · protein
Photorhabdus asymbiotica lectin (phl) in free form
5MXE · Photorhabdus asymbiotica lectin phl: “Photorhabdus asymbiotica lectin (phl) in free form”. X-ray diffraction, 2 ligands (NA, CL), 1 pocket (best druggability 0.79). MolNFT v1 #127466 on GenesisL1: 3D structure, binding sites and…
- PDB
- 5MXE
- Type
- protein
- Length
- 345 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Photorhabdus asymbiotica lectin phl
- UniProt
- C7BLE4
- Ligands
- NA, CL
- Pockets
- 1 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photorhabdus asymbiotica lectin phl | protein | 345 | 0% helix, 46% strand | C7BLE4 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 611 | 0.79 | 0.84 | 42 | NA, CL |
Compared structures
- 5MXE · Photorhabdus asymbiotica lectin (PHL) in free form · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C7BLE4
- Elsewhere: RCSB PDB 5MXE · PDBe 5MXE · UniProt C7BLE4
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