MolNFT v1 · #127262 · protein
Crystal structure of the VPS10P domain of human SORTILIN/NTS3 in complex with triazolone 1
5MRH: “Crystal structure of the VPS10P domain of human SORTILIN/NTS3 in complex with triazolone 1”. X-ray diffraction, 2 ligands (Q9Z, NAG). MolNFT v1 #127262 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MRH
- Type
- protein
- Length
- 639 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q99523
- Ligands
- Q9Z, NAG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 639 | — | Q99523 |
Ligands and binding sites
- Q9Z · 3-(3-methylbutyl)-4~{H}-1,2,3-triazol-5-one · ligand · chains A
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains A
- PGE · Triethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5MRH · Crystal structure of the Vps10p domain of human sortilin/NTS3 in complex with Triazolone 1 · the same entry in another collection · chain A against A, TM-score 1.00
- Q99523 · AlphaFold monomer V2.0 prediction for sortilin (Q99523) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99523
- Elsewhere: RCSB PDB 5MRH · PDBe 5MRH · UniProt Q99523
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