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MolNFT v1 · #126983 · protein

Ligand-induced conformational change of insulin-regulated aminopeptidase: insights on catalytic mechanism and active site plasticity.

5MJ6: “Ligand-induced conformational change of insulin-regulated aminopeptidase: insights on catalytic mechanism and…”. X-ray diffraction, 6 ligands (7O2, NAG, BMA). MolNFT v1 #126983 on GenesisL1: 3D structure, binding sites and pockets…

PDB
5MJ6
Type
protein
Length
1,736 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9UIQ6
Ligands
7O2, NAG, BMA, MAN, ZN, BR

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein870—Q9UIQ6
B—protein866—Q9UIQ6

Ligands and binding sites

  • 7O2 · [(2~{S})-2-[[(2~{S})-1-azanyl-1-oxidanylidene-3-phenyl-propan-2-yl]carbamoyl]-4,4-diphenyl-butyl]-[(1~{R})-1-azanyl-3-phenyl-propyl]phosphinic acid · ligand · 2 copies · chains A, B
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 44 copies · chains A, B
  • BMA · beta-D-mannopyranose · sugar · 9 copies · chains A, B
  • MAN · alpha-D-mannopyranose · sugar · 6 copies · chains A
  • ZN · Zinc ion · metal · 2 copies · chains A, B
  • BR · Bromide ion · ion · 21 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5MJ6 · Ligand-induced conformational change of Insulin-regulated aminopeptidase: insights on… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9UIQ6 · AlphaFold monomer V2.0 prediction for leucyl-cystinyl aminopeptidase (Q9UIQ6) · a predicted model of the same protein · chain B against A, TM-score 0.99

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