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MolNFT v1 · #126964 · protein

Apo form of the soluble pqq-dependent glucose dehydrogenase from acinetobacter calcoaceticus

5MIN: “Apo form of the soluble pqq-dependent glucose dehydrogenase from acinetobacter calcoaceticus”. X-ray diffraction, 2 ligands (CA, CL). MolNFT v1 #126964 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5MIN
Type
protein
Length
905 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P13650
Ligands
CA, CL

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein452—P13650
B—protein453—P13650

Ligands and binding sites

  • CA · Calcium ion · metal · 6 copies · chains A, B
  • CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5MIN · Apo form of the soluble PQQ-dependent Glucose Dehydrogenase from Acinetobacter… · the same entry in another collection · chain A against A, TM-score 1.00
  • P13650 · AlphaFold monomer V2.0 prediction for quinoprotein glucose dehydrogenase B (P13650) · a predicted model of the same protein · chain B against A, TM-score 1.00

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