MolNFT v1 · #126896 · protein
Crystal structure of BAZ2A bromodomain in complex with acetophenone derivative 4
5MGM · Bromodomain adjacent to zinc finger domain protein 2A: “Crystal structure of BAZ2A bromodomain in complex with acetophenone derivative 4”. X-ray diffraction, 1 ligand (7MZ), 1 pocket (best druggability 0.44). MolNFT v1 #126896 on…
- PDB
- 5MGM
- Type
- protein
- Length
- 100 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bromodomain adjacent to zinc finger domain protein 2A
- UniProt
- Q9UIF9
- Ligands
- 7MZ
- Pockets
- 1 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 68% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bromodomain adjacent to zinc finger domain protein 2A | protein | 100 | 68% helix, 0% strand | Q9UIF9 |
Ligands and binding sites
- 7MZ · 1-(3-pyrimidin-2-yloxyphenyl)ethanone · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.44 | 0.83 | 16 | 7MZ |
Compared structures
- 5MGM · Crystal Structure of BAZ2A bromodomain in complex with acetophe derivative 4 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UIF9 · AlphaFold monomer V2.0 prediction for bromodomain adjacent to zinc finger domain protein… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UIF9
- Elsewhere: RCSB PDB 5MGM · PDBe 5MGM · UniProt Q9UIF9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.