MolNFT v1 · #126879 · protein
EM fitted model of bacterial holo-translocon
5MG3: “EM fitted model of bacterial holo-translocon”. Electron microscopy. MolNFT v1 #126879 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MG3
- Type
- protein
- Length
- 1,698 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0AGA2, P0AG96, P0AG99, P0AG90, P0AG93, P25714
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| Y | — | protein | 443 | — | P0AGA2 |
| E | — | protein | 65 | — | P0AG96 |
| G | — | protein | 32 | — | P0AG99 |
| D | — | protein | 414 | — | P0AG90 |
| F | — | protein | 289 | — | P0AG93 |
| C | — | protein | 455 | — | P25714 |
Compared structures
- 5MG3 · EM fitted model of bacterial holo-translocon · the same entry in another collection · chain C against C, TM-score 1.00
- P0AG93 · AlphaFold monomer V2.0 prediction for protein translocase subunit secf (P0AG93) · a predicted model of the same protein · chain F against A, TM-score 0.72
- P0AGA2 · AlphaFold monomer V2.0 prediction for protein translocase subunit secy (P0AGA2) · a predicted model of the same protein · chain Y against A, TM-score 0.60
- P25714 · AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (P25714) · a predicted model of the same protein · chain C against A, TM-score 0.53
- P0AG96 · AlphaFold monomer V2.0 prediction for protein translocase subunit sece (P0AG96) · a predicted model of the same protein · chain E against A, TM-score 0.44
- P0AG99 · AlphaFold monomer V2.0 prediction for protein-export membrane protein secg (P0AG99) · a predicted model of the same protein · chain G against A, TM-score 0.42
- P0AG90 · AlphaFold monomer V2.0 prediction for protein translocase subunit secd (P0AG90) · a predicted model of the same protein · chain D against A, TM-score 0.39
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AGA2
- Every structure of UniProt P0AG96
- Every structure of UniProt P0AG99
- Every structure of UniProt P0AG90
- Every structure of UniProt P0AG93
- Every structure of UniProt P25714
- Elsewhere: RCSB PDB 5MG3 · PDBe 5MG3 · UniProt P0AGA2 · UniProt P0AG96 · UniProt P0AG99 · UniProt P0AG90 · UniProt P0AG93 · UniProt P25714
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