MolNFT v1 · #126624 · protein
Crystal structure of a GH43 arabonofuranosidase from weissella sp. strain 142
5M8E: “Crystal structure of a GH43 arabonofuranosidase from weissella sp. strain 142”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #126624 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5M8E
- Type
- protein
- Length
- 646 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0D1M7L2
- Ligands
- CA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 323 | — | A0A0D1M7L2 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A, B
- GOL · Glycerol · additive · 3 copies · chains A, B
- IMD · Imidazole · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5M8E · Crystal structure of a GH43 arabonofuranosidase from Weissella sp. strain 142 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0D1M7L2
- Elsewhere: RCSB PDB 5M8E · PDBe 5M8E · UniProt A0A0D1M7L2
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