MolNFT v1 · #12656 · protein

Streptomyces lividans xylan binding domain CBM13

1KNL · Endo-1,4-beta-xylanase a: “Streptomyces lividans xylan binding domain CBM13”. X-ray diffraction. MolNFT v1 #12656 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1KNL
Type: protein
Length: 126 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Endo-1,4-beta-xylanase a
EC: 3.2.1.8
UniProt: P26514

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Endo-1,4-beta-xylanase a (EC 3.2.1.8)	protein	126	12% helix, 35% strand	P26514

Ligands and binding sites

GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

1KNL · Streptomyces lividans Xylan Binding Domain cbm13 · the same entry in another collection · chain A against A, TM-score 1.00
P26514 · AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (P26514) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26514
Elsewhere: RCSB PDB 1KNL · PDBe 1KNL · UniProt P26514

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.