MolNFT v1 · #1252 · protein

V-1 nef protein in complex with wild type fyn SH3 domain

1AVZ: “V-1 nef protein in complex with wild type fyn SH3 domain”. X-ray diffraction. MolNFT v1 #1252 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1AVZ
Type: protein
Length: 260 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P03406, P06241

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	100	—	P03406
B	—	protein	103	—	P03406
C	—	protein	57	—	P06241

Compared structures

1AVZ · V-1 nef protein in complex with wild type fyn SH3 domain · the same entry in another collection · chain A against A, TM-score 1.00
P06241 · AlphaFold monomer V2.0 prediction for tyrosine-protein kinase fyn (P06241) · a predicted model of the same protein · chain C against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03406
Every structure of UniProt P06241
Elsewhere: RCSB PDB 1AVZ · PDBe 1AVZ · UniProt P03406 · UniProt P06241

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