MolNFT v1 · #125142 · protein
Crystal structure of quorum-sensing transcriptional activator from yersinia enterocolitica in complex with 3-oxo-N-[(3S)-2- oxotetrahydrofuran-3-YL]HEXANAMIDE
5L09: “Crystal structure of quorum-sensing transcriptional activator from yersinia enterocolitica in complex with…”. X-ray diffraction, 2 ligands (482, SO4). MolNFT v1 #125142 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5L09
- Type
- protein
- Length
- 325 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A1JMX7
- Ligands
- 482, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 161 | — | A1JMX7 |
| B | — | protein | 164 | — | A1JMX7 |
Ligands and binding sites
- 482 · 3-oxo-N-[(3S)-2-oxotetrahydrofuran-3-yl]hexanamide · ligand · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 3 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 8 copies · chains A, B
- ACY · Acetic acid · additive · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5L09 · Crystal Structure of Quorum-Sensing Transcriptional Activator from Yersinia… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1JMX7
- Elsewhere: RCSB PDB 5L09 · PDBe 5L09 · UniProt A1JMX7
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