MolNFT v1 · #124916 · protein
Structure of cow mincle complexed with brartemicin
5KTH · Mincle protein: “Structure of cow mincle complexed with brartemicin”. X-ray diffraction, 3 ligands (6X7, GLC, CA). MolNFT v1 #124916 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KTH
- Type
- protein
- Length
- 143 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mincle protein
- UniProt
- E1BHM0
- Ligands
- 6X7, GLC, CA
Structure
x-ray diffraction · 1 distinct chain · 18% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mincle protein | protein | 143 | 18% helix, 31% strand | E1BHM0 |
Ligands and binding sites
- 6X7 · 2,4-dihydroxy-6-methyl Benzoic acid · ligand · 2 copies · chains A
- GLC · alpha-D-glucopyranose · sugar · 2 copies · chains A
- CA · Calcium ion · metal · 3 copies · chains A
- PGE · Triethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 5KTH · Structure of cow mincle complexed with brartemicin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E1BHM0
- Elsewhere: RCSB PDB 5KTH · PDBe 5KTH · UniProt E1BHM0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.