MolNFT v1 · #124889 · protein

Stationary phase survival protein E (sure) from xylella fastidiosa

5KSQ: “Stationary phase survival protein E (sure) from xylella fastidiosa”. X-ray diffraction, 3 ligands (MN, IOD, PO4). MolNFT v1 #124889 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5KSQ
Type: protein
Length: 509 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9PF20
Ligands: MN, IOD, PO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	252	—	Q9PF20
B	—	protein	257	—	Q9PF20

Ligands and binding sites

MN · Manganese (II) ion · metal · 2 copies · chains A, B
IOD · Iodide ion · ion · 3 copies · chains A, B
PO4 · Phosphate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5KSQ · Stationary phase survival protein E (SurE) from Xylella fastidiosa · the same entry in another collection · chain A against A, TM-score 1.00
Q9PF20 · AlphaFold monomer V2.0 prediction for 5'-nucleotidase sure (Q9PF20) · a predicted model of the same protein · chain B against A, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9PF20
Elsewhere: RCSB PDB 5KSQ · PDBe 5KSQ · UniProt Q9PF20

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