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MolNFT v1 · #124752 · protein

Crosslinked crystal structure of type II fatty acid synthase ketosynthase, fabb, and acyl carrier protein, acpp

5KOF: “Crosslinked crystal structure of type II fatty acid synthase ketosynthase, fabb, and acyl carrier protein…”. X-ray diffraction, 1 ligand (6W5). MolNFT v1 #124752 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5KOF
Type
protein
Length
963 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0A954, B7MJ81
Ligands
6W5

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
B—protein405—P0A954
C—protein75—B7MJ81
A—protein407—P0A954
D—protein76—B7MJ81

Ligands and binding sites

  • 6W5 · [(3~{S})-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-[2-(prop-2-enoylamino) ethylamino]propyl]amino]butyl] dihydrogen phosphate · ligand · 2 copies · chains B, C, A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5KOF · Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and Acyl… · the same entry in another collection · chain D against D, TM-score 1.00
  • P0A954 · AlphaFold monomer V2.0 prediction for 3-oxoacyl-[acyl-carrier- protein] synthase 1… · a predicted model of the same protein · chain B against A, TM-score 1.00
  • B7MJ81 · AlphaFold monomer V2.0 prediction for acyl carrier protein (B7MJ81) · a predicted model of the same protein · chain C against A, TM-score 0.93

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