MolNFT v1 · #124752 · protein
Crosslinked crystal structure of type II fatty acid synthase ketosynthase, fabb, and acyl carrier protein, acpp
5KOF: “Crosslinked crystal structure of type II fatty acid synthase ketosynthase, fabb, and acyl carrier protein…”. X-ray diffraction, 1 ligand (6W5). MolNFT v1 #124752 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KOF
- Type
- protein
- Length
- 963 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0A954, B7MJ81
- Ligands
- 6W5
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 405 | — | P0A954 |
| C | — | protein | 75 | — | B7MJ81 |
| A | — | protein | 407 | — | P0A954 |
| D | — | protein | 76 | — | B7MJ81 |
Ligands and binding sites
- 6W5 · [(3~{S})-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-[2-(prop-2-enoylamino) ethylamino]propyl]amino]butyl] dihydrogen phosphate · ligand · 2 copies · chains B, C, A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KOF · Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and Acyl… · the same entry in another collection · chain D against D, TM-score 1.00
- P0A954 · AlphaFold monomer V2.0 prediction for 3-oxoacyl-[acyl-carrier- protein] synthase 1… · a predicted model of the same protein · chain B against A, TM-score 1.00
- B7MJ81 · AlphaFold monomer V2.0 prediction for acyl carrier protein (B7MJ81) · a predicted model of the same protein · chain C against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A954
- Every structure of UniProt B7MJ81
- Elsewhere: RCSB PDB 5KOF · PDBe 5KOF · UniProt P0A954 · UniProt B7MJ81
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