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Crosslinked crystal structure of type II fatty acid synthase ketosynthase, fabb, and acyl carrier protein, acpp

Analyse Crosslinked crystal structure of type II fatty acid synthase ketosynthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5KOF
Type
protein
Length
963 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0A954, B7MJ81
Ligands
6W5

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
B—protein405—P0A954
C—protein75—B7MJ81
A—protein407—P0A954
D—protein76—B7MJ81

Ligands and binding sites

  • 6W5 · [(3~{S})-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-[2-(prop-2-enoylamino) ethylamino]propyl]amino]butyl] dihydrogen phosphate · ligand · 2 copies · chains B, C, A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5KOF · Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and Acyl… · the same entry in another collection · chain D against D, TM-score 1.00
  • P0A954 · AlphaFold monomer V2.0 prediction for 3-oxoacyl-[acyl-carrier- protein] synthase 1… · a predicted model of the same protein · chain B against A, TM-score 1.00
  • B7MJ81 · AlphaFold monomer V2.0 prediction for acyl carrier protein (B7MJ81) · a predicted model of the same protein · chain C against A, TM-score 0.93

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