MolNFT v1 · #124705 · protein
Native bovine skeletal calsequestrin, low-CA2+ form
5KN0: “Native bovine skeletal calsequestrin, low-CA2+ form”. X-ray diffraction, 3 ligands (NAG, BMA, CA). MolNFT v1 #124705 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KN0
- Type
- protein
- Length
- 1,383 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q05JF3
- Ligands
- NAG, BMA, CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, D | — | protein | 346 | — | Q05JF3 |
| C | — | protein | 345 | — | Q05JF3 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains B, D, A, C
- BMA · beta-D-mannopyranose · sugar
- CA · Calcium ion · metal · 19 copies · chains A, B, C, D
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 10 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KN0 · Native bovine skeletal calsequestrin, low-Ca2+ form · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q05JF3
- Elsewhere: RCSB PDB 5KN0 · PDBe 5KN0 · UniProt Q05JF3
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