MolNFT v1 · #124689 · protein
Trka jm-kinase with {N}-(2-pyridylmethyl)-2-[2-(2-THIENYL)INDOL-1- YL]ACETAMIDE
5KMJ: “Trka jm-kinase with {N}-(2-pyridylmethyl)-2-[2-(2-THIENYL)INDOL-1- YL]ACETAMIDE”. X-ray diffraction, 1 ligand (6UF). MolNFT v1 #124689 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KMJ
- Type
- protein
- Length
- 300 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04629
- Ligands
- 6UF
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 300 | — | P04629 |
Ligands and binding sites
- 6UF · ~{N}-(pyridin-2-ylmethyl)-2-(2-thiophen-2-ylindol-1-yl)ethanamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KMJ · TrkA JM-kinase with {N}-(2-pyridylmethyl)-2-[2-(2-thienyl)indol-1-yl]acetamide · the same entry in another collection · chain A against A, TM-score 1.00
- P04629 · AlphaFold monomer V2.0 prediction for high affinity nerve growth factor receptor (P04629) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04629
- Elsewhere: RCSB PDB 5KMJ · PDBe 5KMJ · UniProt P04629
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.