MolNFT v1 · #124682 · protein
Human histidine triad nucleotide binding protein 1 (HHINT1) H112N mutant nucleoside L-TRP phosphoramidate substrate complex
5KMB: “Human histidine triad nucleotide binding protein 1 (HHINT1) H112N mutant nucleoside L-TRP phosphoramidate…”. X-ray diffraction, 2 ligands (6UT, CL). MolNFT v1 #124682 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KMB
- Type
- protein
- Length
- 227 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P49773
- Ligands
- 6UT, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 115 | — | P49773 |
| B | — | protein | 112 | — | P49773 |
Ligands and binding sites
- 6UT · [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-~{N}-[(2~{S})-3-(1~{H}-indol-3-yl)-1-(methylamino)-1-oxidanylidene-propan-2-yl]phosphonamidic acid · ligand · chains A, B
- CL · Chloride ion · ion · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KMB · Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant nucleoside L-Trp… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49773
- Elsewhere: RCSB PDB 5KMB · PDBe 5KMB · UniProt P49773
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