MolNFT v1 · #124484 · protein
2.95A resolution structure of apo independent phosphoglycerate mutase from C. elegans (monoclinic form)
5KGM: “2.95A resolution structure of apo independent phosphoglycerate mutase from C. elegans (monoclinic form)”. X-ray diffraction, 3 ligands (MN, ZN, CL). MolNFT v1 #124484 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KGM
- Type
- protein
- Length
- 1,037 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G5EFZ1
- Ligands
- MN, ZN, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 519 | — | G5EFZ1 |
| B | — | protein | 518 | — | G5EFZ1 |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 2 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- CL · Chloride ion · ion · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KGM · 2.95A resolution structure of Apo independent phosphoglycerate mutase from C. elegans… · the same entry in another collection · chain A against A, TM-score 1.00
- G5EFZ1 · AlphaFold monomer V2.0 prediction for 2,3-bisphosphoglycerate- independent… · a predicted model of the same protein · chain B against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G5EFZ1
- Elsewhere: RCSB PDB 5KGM · PDBe 5KGM · UniProt G5EFZ1
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