MolNFT v1 · #124429 · protein
Crystal structure of an aldedhyde dehydrogenase from burkholderia vietnamiensis
5KF0: “Crystal structure of an aldedhyde dehydrogenase from burkholderia vietnamiensis”. X-ray diffraction, 2 ligands (NDP, MG). MolNFT v1 #124429 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KF0
- Type
- protein
- Length
- 1,908 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A4JLJ7
- Ligands
- NDP, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 480 | — | A4JLJ7 |
| B, C, D | — | protein | 476 | — | A4JLJ7 |
Ligands and binding sites
- NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 4 copies · chains A, B, C, D
- MG · Magnesium ion · metal · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 13 copies · chains A, B, D, C
- ACT · Acetate ion · additive · 7 copies · chains A, B, C, D
- MRD · (4R)-2-methylpentane-2,4-diol · additive · 5 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KF0 · Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4JLJ7
- Elsewhere: RCSB PDB 5KF0 · PDBe 5KF0 · UniProt A4JLJ7
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