MolNFT v1 · #124403 · protein + DNA
Mouse KLF4 E446P ZNF1-3 and MPG/MPG sequence DNA complex structure
5KE8: “Mouse KLF4 E446P ZNF1-3 and MPG/MPG sequence DNA complex structure”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #124403 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KE8
- Type
- protein + DNA
- Length
- 105 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q60793
- Ligands
- ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 85 | — | Q60793 |
| B | — | dna | 10 | — | — |
| C | — | dna | 10 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KE8 · mouse Klf4 E446P ZnF1-3 and MpG/MpG sequence DNA complex structure · the same entry in another collection · chain A against A, TM-score 1.00
- Q60793 · AlphaFold monomer V2.0 prediction for krueppel-like factor 4 (Q60793) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q60793
- Elsewhere: RCSB PDB 5KE8 · PDBe 5KE8 · UniProt Q60793
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