MolNFT v1 · #124401 · protein + DNA

Mouse KLF4 ZNF1-3 and TPG/CPA sequence DNA complex structure

5KE6: “Mouse KLF4 ZNF1-3 and TPG/CPA sequence DNA complex structure”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #124401 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5KE6
Type: protein + DNA
Length: 105 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q60793
Ligands: ZN

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	85	—	Q60793
B	—	dna	10	—	—
C	—	dna	10	—	—

Ligands and binding sites

ZN · Zinc ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5KE6 · mouse Klf4 ZnF1-3 and TpG/CpA sequence DNA complex structure · the same entry in another collection · chain A against A, TM-score 1.00
Q60793 · AlphaFold monomer V2.0 prediction for krueppel-like factor 4 (Q60793) · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q60793
Elsewhere: RCSB PDB 5KE6 · PDBe 5KE6 · UniProt Q60793

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