MolNFT v1 · #124381 · protein
Crystal structure of the 4 alanine insertion variant of the gi ALPHA1 subunit bound to gtpgammas
5KDL: “Crystal structure of the 4 alanine insertion variant of the gi ALPHA1 subunit bound to gtpgammas”. X-ray diffraction, 2 ligands (GSP, MG). MolNFT v1 #124381 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KDL
- Type
- protein
- Length
- 618 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P10824
- Ligands
- GSP, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 307 | — | P10824 |
| B | — | protein | 311 | — | P10824 |
Ligands and binding sites
- GSP · 5'-guanosine-diphosphate-monothiophosphate · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KDL · Crystal structure of the 4 alanine insertion variant of the Gi alpha1 subunit bound to… · the same entry in another collection · chain A against A, TM-score 1.00
- P10824 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10824
- Elsewhere: RCSB PDB 5KDL · PDBe 5KDL · UniProt P10824
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