MolNFT v1 · #124353 · protein
Horse liver S48T alcohol dehydrogenase complexed with NAD and pentafluorobenzyl alcohol
5KCP: “Horse liver S48T alcohol dehydrogenase complexed with NAD and pentafluorobenzyl alcohol”. X-ray diffraction, 3 ligands (PFB, NAJ, ZN). MolNFT v1 #124353 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KCP
- Type
- protein
- Length
- 748 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P00327
- Ligands
- PFB, NAJ, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 374 | — | P00327 |
Ligands and binding sites
- PFB · 2,3,4,5,6-pentafluorobenzyl alcohol · ligand · 4 copies · chains A, B
- NAJ · Nicotinamide-adenine-dinucleotide (acidic form) · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 4 copies · chains A, B
- MRD · (4R)-2-methylpentane-2,4-diol · additive · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KCP · horse liver S48T alcohol dehydrogenase complexed with NAD and pentafluorobenzyl alcohol · the same entry in another collection · chain A against A, TM-score 1.00
- P00327 · AlphaFold monomer V2.0 prediction for alcohol dehydrogenase E chain (P00327) · a predicted model of the same protein · chain B against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00327
- Elsewhere: RCSB PDB 5KCP · PDBe 5KCP · UniProt P00327
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