MolNFT v1 · #124045 · protein

Crystal structure of the fluoroacetate dehalogenase RPA1163 - ASP110ASN/GLYCOLATE - cocrystallized

5K3E: “Crystal structure of the fluoroacetate dehalogenase RPA1163 - ASP110ASN/GLYCOLATE - cocrystallized”. X-ray diffraction, 2 ligands (GOA, CL). MolNFT v1 #124045 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5K3E
Type: protein
Length: 589 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q6NAM1
Ligands: GOA, CL

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	295	—	Q6NAM1
B	—	protein	294	—	Q6NAM1

Ligands and binding sites

GOA · Glycolic acid · ligand · chains A
CL · Chloride ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5K3E · Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Glycolate… · the same entry in another collection · chain A against A, TM-score 1.00
Q6NAM1 · AlphaFold monomer V2.0 prediction for fluoroacetate dehalogenase (Q6NAM1) · a predicted model of the same protein · chain B against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6NAM1
Elsewhere: RCSB PDB 5K3E · PDBe 5K3E · UniProt Q6NAM1

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