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MolNFT v1 · #124015 · protein

Structure of nnqqny from yeast prion SUP35 with cadmium acetate determined by microed

5K2F: “Structure of nnqqny from yeast prion SUP35 with cadmium acetate determined by microed”. Electron crystallography, 1 ligand (CD). MolNFT v1 #124015 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5K2F
Type
protein
Length
6 residues
Chains
1
Method
electron crystallography
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P05453
Ligands
CD

Structure

electron crystallography · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein6—P05453

Ligands and binding sites

  • CD · Cadmium ion · metal · chains A
  • ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5K2F · Structure of NNQQNY from yeast prion Sup35 with cadmium acetate determined by MicroED · the same entry in another collection · chain A against A, TM-score 1.00
  • P05453 · AlphaFold monomer V2.0 prediction for eukaryotic peptide chain release factor GTP-binding… · a predicted model of the same protein · chain A against A, TM-score 0.66

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