MolNFT v1 · #12356 · protein

PDZ1 of SAP90

1KEF · Synapse associated protein-90: “PDZ1 of SAP90”. Solution nmr, 1 pocket (best druggability 0.30). MolNFT v1 #12356 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1KEF
Type: protein
Length: 93 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Synapse associated protein-90
UniProt: P78352
Pockets: 1 · best druggability 0.30

Structure

solution nmr · 1 distinct chain · 16% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Synapse associated protein-90	protein	93	16% helix, 24% strand	P78352

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	70	0.30	0.74	14	empty

Compared structures

1KEF · PDZ1 of SAP90 · the same entry in another collection · chain A against A, TM-score 1.00
P78352 · AlphaFold monomer V2.0 prediction for disks large homolog 4 (P78352) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P78352
Elsewhere: RCSB PDB 1KEF · PDBe 1KEF · UniProt P78352

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