MolNFT v1 · #122803 · protein
Monomeric human CU,ZN superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P7/8
5J0G · OXIDOREDUCTASE,SUPEROXIDE dismutase [cu-zn]: “Monomeric human CU,ZN superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P7/8”. X-ray diffraction, 3 pockets (best druggability 0.49). MolNFT v1 #122803 on…
- PDB
- 5J0G
- Type
- protein
- Length
- 226 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- OXIDOREDUCTASE,SUPEROXIDE dismutase [cu-zn]
- EC
- 1.15.1.1
- UniProt
- P00441
- Pockets
- 3 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | OXIDOREDUCTASE,SUPEROXIDE dismutase [cu-zn] (EC 1.15.1.1) | protein | 113 | 0% helix, 56% strand | P00441 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 239 | 0.49 | 0.74 | 27 | empty |
| 2 | 120 | 0.41 | 0.76 | 24 | empty |
| 3 | 67 | 0.34 | 0.76 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 508 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 5J0G · Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00441
- Elsewhere: RCSB PDB 5J0G · PDBe 5J0G · UniProt P00441
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