MolNFT v1 · #122431 · protein

Structure of transcriptional regulatory repressor protein - ethr from mycobacterium tuberculosis in complex with N-(cyclopentylmethyl) cyclopentanecarboxamide at 2.02A resolution

5IOZ · Tetr-family transcriptional regulatory repressor protein: “Structure of transcriptional regulatory repressor protein - ethr from mycobacterium tuberculosis in complex…”. X-ray diffraction, 1 ligand (6C4), 1 pocket (best druggability…

PDB: 5IOZ
Type: protein
Length: 193 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tetr-family transcriptional regulatory repressor protein
UniProt: A5U9I4
Ligands: 6C4
Pockets: 1 · best druggability 0.76

Structure

x-ray diffraction · 1 distinct chain · 79% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tetr-family transcriptional regulatory repressor protein	protein	193	79% helix, 0% strand	A5U9I4

Ligands and binding sites

6C4 · N-(cyclopentylmethyl)cyclopentanecarboxamide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	266	0.76	0.89	39	6C4

Compared structures

5IOZ · Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A5U9I4
Elsewhere: RCSB PDB 5IOZ · PDBe 5IOZ · UniProt A5U9I4

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