MolNFT v1 · #122256 · protein

Crystal structure of the spx domain of chaetomium thermophilum VTC4 in complex with inositol hexakisphosphate (INSP6).

5IJP · Putative uncharacterized protein: “Crystal structure of the spx domain of chaetomium thermophilum VTC4 in complex with inositol hexakisphosphate…”. X-ray diffraction, 1 ligand (IHP), 1 pocket (best druggability 0.42). MolNFT v1…

PDB: 5IJP
Type: protein
Length: 178 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein
UniProt: G0SCH1
Ligands: IHP
Pockets: 1 · best druggability 0.42

Structure

x-ray diffraction · 1 distinct chain · 75% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative uncharacterized protein	protein	178	75% helix, 2% strand	G0SCH1

Ligands and binding sites

IHP · Inositol hexakisphosphate · ligand · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.42	0.79	17	empty

Compared structures

5IJP · Crystal structure of the SPX domain of Chaetomium thermophilum Vtc4 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G0SCH1
Elsewhere: RCSB PDB 5IJP · PDBe 5IJP · UniProt G0SCH1

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