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Crystal structure of the spx domain of chaetomium thermophilum VTC4 in complex with inositol hexakisphosphate (INSP6).

Analyse Crystal structure of the spx domain of chaetomium thermophilum VTC4 in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5IJP
Type: protein
Length: 178 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein
UniProt: G0SCH1
Ligands: IHP
Pockets: 1 · best druggability 0.42

Structure

x-ray diffraction · 1 distinct chain · 75% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative uncharacterized protein	protein	178	75% helix, 2% strand	G0SCH1

Ligands and binding sites

IHP · Inositol hexakisphosphate · ligand · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.42	0.79	17	empty

Compared structures

5IJP · Crystal structure of the SPX domain of Chaetomium thermophilum Vtc4 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G0SCH1
Elsewhere: RCSB PDB 5IJP · PDBe 5IJP · UniProt G0SCH1

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