MolNFT v1 · #121941 · protein
Structure of a ubiquitin like protein with an E1 fragment
5IA8 · Ubiquitin-like modifier-activating enzyme 5,UBIQUITIN-fold…: “Structure of a ubiquitin like protein with an E1 fragment”. X-ray diffraction, 1 pocket (best druggability 0.32). MolNFT v1 #121941 on GenesisL1: 3D structure, binding…
- PDB
- 5IA8
- Type
- protein
- Length
- 182 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin-like modifier-activating enzyme 5,UBIQUITIN-fold modifier 1
- UniProt
- E7EQ61, P61960
- Pockets
- 1 · best druggability 0.32
Structure
x-ray diffraction · 2 distinct chains · 25% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin-like modifier-activating enzyme 5,UBIQUITIN-fold modifier 1 | protein | 92 | 24% helix, 29% strand | E7EQ61, P61960 |
| B | Ubiquitin-like modifier-activating enzyme 5,UBIQUITIN-fold modifier 1 | protein | 90 | 26% helix, 33% strand | E7EQ61, P61960 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 75 | 0.32 | 0.74 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 856 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E7EQ61
- Every structure of UniProt P61960
- Elsewhere: RCSB PDB 5IA8 · PDBe 5IA8 · UniProt E7EQ61 · UniProt P61960
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