MolNFT v1 · #121617 · protein
D-cysteine bound C93A mutant of cysteine dioxygenase at pH 8
5I0R · Cysteine dioxygenase type 1: “D-cysteine bound C93A mutant of cysteine dioxygenase at pH 8”. X-ray diffraction, 3 ligands (DCY, FE, CL), 1 pocket (best druggability 0.56). MolNFT v1 #121617 on GenesisL1: 3D structure, binding sites…
- PDB
- 5I0R
- Type
- protein
- Length
- 186 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cysteine dioxygenase type 1
- EC
- 1.13.11.20
- UniProt
- P21816
- Ligands
- DCY, FE, CL
- Pockets
- 1 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cysteine dioxygenase type 1 (EC 1.13.11.20) | protein | 186 | 15% helix, 35% strand | P21816 |
Ligands and binding sites
- DCY · D-cysteine · ligand · chains A
- FE · Fe (III) ion · metal · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 107 | 0.56 | 0.84 | 27 | FE, DCY, CL |
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P21816
- Elsewhere: RCSB PDB 5I0R · PDBe 5I0R · UniProt P21816
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