MolNFT v1 · #121603 · protein
Crystal structure of predicted acyltransferase yjdj with acyl-CoA N- acyltransferase domain from escherichia COLI str. K-12
5I0C · Uncharacterized protein yjdj: “Crystal structure of predicted acyltransferase yjdj with acyl-CoA N- acyltransferase domain from escherichia…”. X-ray diffraction, 3 ligands (NI, CD, PO4). MolNFT v1 #121603 on GenesisL1: 3D structure…
- PDB
- 5I0C
- Type
- protein
- Length
- 89 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein yjdj
- UniProt
- P39274
- Ligands
- NI, CD, PO4
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein yjdj | protein | 89 | 37% helix, 35% strand | P39274 |
Ligands and binding sites
- NI · Nickel (II) ion · metal · 3 copies · chains A
- CD · Cadmium ion · metal · chains A
- PO4 · Phosphate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (engineered).
Compared structures
- 5I0C · Crystal structure of predicted acyltransferase YjdJ with acyl-CoA N-acyltransferase… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39274
- Elsewhere: RCSB PDB 5I0C · PDBe 5I0C · UniProt P39274 · AlphaFold DB P39274
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.