MolNFT v1 · #121576 · protein
Secreted internalin-like protein LMO2445 from listeria monocytogenes
5HZL · LMO2445 protein: “Secreted internalin-like protein LMO2445 from listeria monocytogenes”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #121576 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5HZL
- Type
- protein
- Length
- 280 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- LMO2445 protein
- UniProt
- Q8Y4J3
- Ligands
- CA
Structure
x-ray diffraction · 1 distinct chain · 14% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | LMO2445 protein | protein | 280 | 14% helix, 27% strand | Q8Y4J3 |
Ligands and binding sites
- CA · Calcium ion · metal · 7 copies · chains B
- PG5 · 1-methoxy-2-[2-(2-methoxy-ethoxy]-ethane · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 5HZL · Secreted Internalin-like protein Lmo2445 from Listeria monocytogenes · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Y4J3
- Elsewhere: RCSB PDB 5HZL · PDBe 5HZL · UniProt Q8Y4J3
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