MolNFT v1 · #121272 · protein
Acoustic injectors for drop-on-demand serial femtosecond crystallography
5HQD · Thermolysin: “Acoustic injectors for drop-on-demand serial femtosecond crystallography”. X-ray diffraction, 2 ligands (CA, ZN), 1 pocket (best druggability 0.53). MolNFT v1 #121272 on GenesisL1: 3D structure, binding sites and…
- PDB
- 5HQD
- Type
- protein
- Length
- 316 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Thermolysin
- UniProt
- V5IRV7
- Ligands
- CA, ZN
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thermolysin | protein | 316 | 40% helix, 16% strand | V5IRV7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 136 | 0.53 | 0.81 | 27 | ZN |
Compared structures
- 5HQD · Acoustic injectors for drop-on-demand serial femtosecond crystallography · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt V5IRV7
- Elsewhere: RCSB PDB 5HQD · PDBe 5HQD · UniProt V5IRV7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.