MolNFT v1 · #120623 · protein
Crystal structure of an asymmetric dimer of the geobacillus stearothermophilus smc hinge domain
5H69 · Chromosome partition protein smc: “Crystal structure of an asymmetric dimer of the geobacillus stearothermophilus smc hinge domain”. X-ray diffraction, 3 pockets (best druggability 0.44). MolNFT v1 #120623 on GenesisL1: 3D…
- PDB
- 5H69
- Type
- protein
- Length
- 497 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chromosome partition protein smc
- UniProt
- A0A0K2H586
- Pockets
- 3 · best druggability 0.44
Structure
x-ray diffraction · 2 distinct chains · 60% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chromosome partition protein smc | protein | 252 | 61% helix, 13% strand | A0A0K2H586 |
| B | Chromosome partition protein smc | protein | 245 | 60% helix, 14% strand | A0A0K2H586 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.44 | 0.83 | 13 | empty |
| 2 | 102 | 0.35 | 0.73 | 21 | empty |
| 3 | 70 | 0.30 | 0.73 | 22 | empty |
Interfaces
1 interface between chains.
- A–B · 1233 Ų buried · 26 hydrogen bonds · protein-protein
Compared structures
- 5H69 · Crystal structure of an asymmetric dimer of the Geobacillus stearothermophilus SMC hinge… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0K2H586
- Elsewhere: RCSB PDB 5H69 · PDBe 5H69 · UniProt A0A0K2H586
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.