MolNFT v1 · #11984 · protein
Crystal structure analysis of squash (cucurbita moschata) glycerol-3-phosphate (1)-acyltransferase
1K30 · Glycerol-3-phosphate acyltransferase: “Crystal structure analysis of squash (cucurbita moschata) glycerol-3-phosphate (1)-acyltransferase”. X-ray diffraction, 3 pockets (best druggability 0.77). MolNFT v1 #11984 on GenesisL1: 3D…
- PDB
- 1K30
- Type
- protein
- Length
- 363 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glycerol-3-phosphate acyltransferase
- EC
- 2.3.1.15
- UniProt
- P10349
- Pockets
- 3 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 52% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) | protein | 363 | 52% helix, 12% strand | P10349 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 687 | 0.77 | 0.82 | 66 | empty |
| 2 | 71 | 0.37 | 0.77 | 18 | empty |
| 3 | 65 | 0.34 | 0.76 | 12 | empty |
Compared structures
- 1K30 · Crystal Structure Analysis of Squash (Cucurbita moschata) glycerol-3-phosphate… · the same entry in another collection · chain A against A, TM-score 1.00
- P10349 · AlphaFold monomer V2.0 prediction for glycerol-3-phosphate acyltransferase ATS12… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10349
- Elsewhere: RCSB PDB 1K30 · PDBe 1K30 · UniProt P10349
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