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Crystal structure analysis of squash (cucurbita moschata) glycerol-3-phosphate (1)-acyltransferase

Analyse Crystal structure analysis of squash (cucurbita moschata) glycerol-3-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1K30
Type: protein
Length: 363 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Glycerol-3-phosphate acyltransferase
EC: 2.3.1.15
UniProt: P10349
Pockets: 3 · best druggability 0.77

Structure

x-ray diffraction · 1 distinct chain · 52% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	protein	363	52% helix, 12% strand	P10349

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	687	0.77	0.82	66	empty
2	71	0.37	0.77	18	empty
3	65	0.34	0.76	12	empty

Compared structures

1K30 · Crystal Structure Analysis of Squash (Cucurbita moschata) glycerol-3-phosphate… · the same entry in another collection · chain A against A, TM-score 1.00
P10349 · AlphaFold monomer V2.0 prediction for glycerol-3-phosphate acyltransferase ATS12… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10349
Elsewhere: RCSB PDB 1K30 · PDBe 1K30 · UniProt P10349

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