MolNFT v1 · #119668 · protein
Psbo subunit of photosystem II, beta barrel domain at 100K, pH 6
5G38 · Photosystem II manganese-stabilizing polypeptide: “Psbo subunit of photosystem II, beta barrel domain at 100K, pH 6”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #119668 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5G38
- Type
- protein
- Length
- 172 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Photosystem II manganese-stabilizing polypeptide
- UniProt
- P0A432
- Ligands
- CA
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 62% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II manganese-stabilizing polypeptide | protein | 172 | 0% helix, 62% strand | P0A432 |
Ligands and binding sites
- CA · Calcium ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5G38 · PsbO subunit of Photosystem II, beta barrel domain at 100K, pH 6 · the same entry in another collection · chain A against A, TM-score 1.00
- P0A432 · AlphaFold monomer V2.0 prediction for photosystem II manganese- stabilizing polypeptide… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A432
- Elsewhere: RCSB PDB 5G38 · PDBe 5G38 · UniProt P0A432
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