MolNFT v1 · #119365 · protein
Structure of surface layer protein sbsc, domains 4-9
5FTX: “Structure of surface layer protein sbsc, domains 4-9”. X-ray diffraction, 2 ligands (CA, ZN), 4 pockets (best druggability 0.40). MolNFT v1 #119365 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5FTX
- Type
- protein
- Length
- 651 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Surface layer protein
- UniProt
- O68840
- Ligands
- CA, ZN
- Pockets
- 4 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Surface layer protein | protein | 651 | 6% helix, 45% strand | O68840 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.40 | 0.77 | 17 | empty |
| 2 | 142 | 0.40 | 0.74 | 29 | empty |
| 3 | 59 | 0.32 | 0.76 | 17 | empty |
| 4 | 79 | 0.32 | 0.74 | 16 | empty |
Compared structures
- 5FTX · Structure of surface layer protein SbsC, domains 4-9 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O68840
- Elsewhere: RCSB PDB 5FTX · PDBe 5FTX · UniProt O68840
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