MolNFT v1 · #119196 · protein

CRYPTIC TIR

5FOR · Phosphoinositide 3-kinase adapter protein 1: “CRYPTIC TIR”. X-ray diffraction, 1 ligand (I3C), 1 pocket (best druggability 0.40). MolNFT v1 #119196 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5FOR
Type: protein
Length: 134 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phosphoinositide 3-kinase adapter protein 1
UniProt: Q6ZUJ8
Ligands: I3C
Pockets: 1 · best druggability 0.40

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphoinositide 3-kinase adapter protein 1	protein	134	46% helix, 18% strand	Q6ZUJ8

Ligands and binding sites

I3C · 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid · ligand · chains A
1PE · Pentaethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	65	0.40	0.80	17	empty

Modifications

Observed in the structure: 3 modified, 1 covalent (methylation, covalent ligand).

Compared structures

5FOR · Cryptic TIR · the same entry in another collection · chain A against A, TM-score 1.00
Q6ZUJ8 · AlphaFold monomer V2.0 prediction for phosphoinositide 3-kinase adapter protein 1 (Q6ZUJ8) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6ZUJ8
Elsewhere: RCSB PDB 5FOR · PDBe 5FOR · UniProt Q6ZUJ8

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