MolNFT v1 · #118996 · protein

Fhit-substrate analog

5FIT · Fragile histidine triad protein: “Fhit-substrate analog”. X-ray diffraction, 1 ligand (AP2), 1 pocket (best druggability 0.38). MolNFT v1 #118996 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5FIT
Type: protein
Length: 126 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Fragile histidine triad protein
EC: 3.6.1.29
UniProt: P49789
Ligands: AP2
Pockets: 1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Fragile histidine triad protein (EC 3.6.1.29)	protein	126	36% helix, 25% strand	P49789

Ligands and binding sites

AP2 · Phosphomethylphosphonic acid adenosyl ester · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	114	0.38	0.74	23	AP2

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

5FIT · Fhit-substrate analog · the same entry in another collection · chain A against A, TM-score 1.00
P49789 · AlphaFold monomer V2.0 prediction for BIS(5'-adenosyl)-triphosphatase (P49789) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P49789
Elsewhere: RCSB PDB 5FIT · PDBe 5FIT · UniProt P49789

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